Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm38223-201ENSMUST00000194484 695 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Gm45668-201ENSMUST00000211271 493 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Gm26315-201ENSMUST00000083890 321 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim27Q62158 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.52■□□□□ 0.24
Trim27Q62158 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.52■□□□□ 0.23
Trim27Q62158 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.52■□□□□ 0.23
Trim27Q62158 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim27Q62158 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim27Q62158 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim27Q62158 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.52■□□□□ 0.23
Trim27Q62158 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim27Q62158 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
Trim27Q62158 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim27Q62158 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim27Q62158 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim27Q62158 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim27Q62158 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Mir7221-201ENSMUST00000184009 72 ntBASIC16.51■□□□□ 0.23
Trim27Q62158 Mir6392-201ENSMUST00000184924 108 ntBASIC16.51■□□□□ 0.23
Trim27Q62158 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim27Q62158 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim27Q62158 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.51■□□□□ 0.23
Trim27Q62158 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim27Q62158 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim27Q62158 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim27Q62158 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.5■□□□□ 0.23
Trim27Q62158 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim27Q62158 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim27Q62158 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.5■□□□□ 0.23
Trim27Q62158 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Gm15823-201ENSMUST00000064305 670 ntBASIC16.5■□□□□ 0.23
Trim27Q62158 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim27Q62158 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.5■□□□□ 0.23
Trim27Q62158 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim27Q62158 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.49■□□□□ 0.23
Trim27Q62158 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim27Q62158 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim27Q62158 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trim27Q62158 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.49■□□□□ 0.23
Trim27Q62158 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim27Q62158 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms