Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gli3Q61602 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.66■□□□□ 0.42
Gli3Q61602 Gm25881-201ENSMUST00000157783 103 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Gm43520-201ENSMUST00000197996 164 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.66■□□□□ 0.42
Gli3Q61602 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gli3Q61602 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.65■□□□□ 0.42
Gli3Q61602 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Gli3Q61602 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.65■□□□□ 0.42
Gli3Q61602 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gli3Q61602 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC17.65■□□□□ 0.42
Gli3Q61602 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gli3Q61602 Gm8199-201ENSMUST00000121323 823 ntBASIC17.65■□□□□ 0.42
Gli3Q61602 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC17.65■□□□□ 0.42
Gli3Q61602 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC17.65■□□□□ 0.42
Gli3Q61602 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.65■□□□□ 0.42
Gli3Q61602 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gli3Q61602 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.65■□□□□ 0.42
Gli3Q61602 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gli3Q61602 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gli3Q61602 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gli3Q61602 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC17.64■□□□□ 0.41
Gli3Q61602 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC17.64■□□□□ 0.41
Gli3Q61602 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.64■□□□□ 0.41
Gli3Q61602 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Gli3Q61602 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm17827-201ENSMUST00000211825 742 ntBASIC17.64■□□□□ 0.41
Gli3Q61602 Gm270-201ENSMUST00000223010 976 ntBASIC17.64■□□□□ 0.41
Gli3Q61602 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gli3Q61602 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.64■□□□□ 0.41
Gli3Q61602 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gli3Q61602 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gli3Q61602 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gli3Q61602 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.63■□□□□ 0.41
Gli3Q61602 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.63■□□□□ 0.41
Gli3Q61602 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gli3Q61602 Gm4862-201ENSMUST00000170405 438 ntBASIC17.63■□□□□ 0.41
Gli3Q61602 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Gli3Q61602 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.63■□□□□ 0.41
Gli3Q61602 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gli3Q61602 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.63■□□□□ 0.41
Gli3Q61602 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.63■□□□□ 0.41
Gli3Q61602 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gli3Q61602 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gli3Q61602 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gli3Q61602 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Gli3Q61602 Gm14644-201ENSMUST00000116671 647 ntBASIC17.62■□□□□ 0.41
Gli3Q61602 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gli3Q61602 Gm13937-201ENSMUST00000121000 988 ntBASIC17.62■□□□□ 0.41
Gli3Q61602 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC17.62■□□□□ 0.41
Gli3Q61602 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms