Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm11597-201ENSMUST00000121423 964 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm13611-201ENSMUST00000118269 318 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm15131-201ENSMUST00000119124 595 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm17391-201ENSMUST00000171036 126 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm9540-201ENSMUST00000188230 478 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.73□□□□□ -0.05
Col11a1Q61245 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.73□□□□□ -0.05
Col11a1Q61245 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col11a1Q61245 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col11a1Q61245 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.72□□□□□ -0.05
Col11a1Q61245 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.72□□□□□ -0.05
Col11a1Q61245 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.72□□□□□ -0.05
Col11a1Q61245 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col11a1Q61245 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col11a1Q61245 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Col11a1Q61245 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col11a1Q61245 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col11a1Q61245 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col11a1Q61245 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col11a1Q61245 Gm12058-201ENSMUST00000118614 437 ntBASIC14.71□□□□□ -0.06
Col11a1Q61245 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col11a1Q61245 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.71□□□□□ -0.06
Col11a1Q61245 Gm10312-201ENSMUST00000078515 489 ntBASIC14.71□□□□□ -0.06
Col11a1Q61245 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.71□□□□□ -0.06
Col11a1Q61245 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col11a1Q61245 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms