Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm23931-201ENSMUST00000103842 109 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm24644-201ENSMUST00000157114 139 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm27514-201ENSMUST00000183692 110 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Gm3961-201ENSMUST00000204425 994 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Gm18056-201ENSMUST00000207670 568 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Gm18061-201ENSMUST00000208350 562 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Gm18063-201ENSMUST00000208529 568 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Gm18052-201ENSMUST00000208750 559 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.35□□□□□ -0.27
Sim1Q61045 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
Sim1Q61045 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sim1Q61045 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.34□□□□□ -0.27
Sim1Q61045 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.34□□□□□ -0.27
Sim1Q61045 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
Sim1Q61045 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sim1Q61045 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.34□□□□□ -0.27
Sim1Q61045 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm15240-201ENSMUST00000118156 720 ntBASIC13.34□□□□□ -0.27
Sim1Q61045 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.34□□□□□ -0.27
Sim1Q61045 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sim1Q61045 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.34□□□□□ -0.27
Sim1Q61045 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sim1Q61045 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Sim1Q61045 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sim1Q61045 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Sim1Q61045 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Sim1Q61045 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
Sim1Q61045 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sim1Q61045 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm15236-201ENSMUST00000117309 379 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm24420-201ENSMUST00000176676 59 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.33□□□□□ -0.28
Sim1Q61045 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm38266-201ENSMUST00000194931 421 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gm37466-201ENSMUST00000195692 652 ntBASIC13.33□□□□□ -0.28
Sim1Q61045 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.33□□□□□ -0.28
Sim1Q61045 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
Sim1Q61045 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.33□□□□□ -0.28
Sim1Q61045 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.33□□□□□ -0.28
Sim1Q61045 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.33□□□□□ -0.28
Sim1Q61045 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sim1Q61045 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sim1Q61045 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms