Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm42779-201ENSMUST00000198807 406 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm15432-201ENSMUST00000121106 195 ntBASIC12.97□□□□□ -0.33
Col12a1Q60847 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col12a1Q60847 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col12a1Q60847 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col12a1Q60847 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.96□□□□□ -0.33
Col12a1Q60847 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Col12a1Q60847 Gm23949-201ENSMUST00000104027 127 ntBASIC12.96□□□□□ -0.34
Col12a1Q60847 Gm15711-201ENSMUST00000118889 535 ntBASIC12.96□□□□□ -0.34
Col12a1Q60847 Gm9463-201ENSMUST00000206707 601 ntBASIC12.96□□□□□ -0.34
Col12a1Q60847 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.96□□□□□ -0.34
Col12a1Q60847 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col12a1Q60847 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col12a1Q60847 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col12a1Q60847 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.96□□□□□ -0.34
Col12a1Q60847 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col12a1Q60847 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm34023-201ENSMUST00000195539 217 ntBASIC12.95□□□□□ -0.34
Col12a1Q60847 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.95□□□□□ -0.34
Col12a1Q60847 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.95□□□□□ -0.34
Col12a1Q60847 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.95□□□□□ -0.34
Col12a1Q60847 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col12a1Q60847 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col12a1Q60847 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms