Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Satb1Q60611 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.97□□□□□ -0.17
Satb1Q60611 Gm11524-201ENSMUST00000119349 807 ntBASIC13.97□□□□□ -0.17
Satb1Q60611 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.97□□□□□ -0.17
Satb1Q60611 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.97□□□□□ -0.17
Satb1Q60611 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.97□□□□□ -0.17
Satb1Q60611 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.97□□□□□ -0.17
Satb1Q60611 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Satb1Q60611 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Satb1Q60611 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Satb1Q60611 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.97□□□□□ -0.17
Satb1Q60611 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Satb1Q60611 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Satb1Q60611 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.96□□□□□ -0.17
Satb1Q60611 Gm22018-201ENSMUST00000104357 131 ntBASIC13.96□□□□□ -0.17
Satb1Q60611 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Satb1Q60611 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm2383-201ENSMUST00000181461 807 ntBASIC13.96□□□□□ -0.17
Satb1Q60611 Gm43094-201ENSMUST00000196549 921 ntBASIC13.96□□□□□ -0.17
Satb1Q60611 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.96□□□□□ -0.17
Satb1Q60611 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Satb1Q60611 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Satb1Q60611 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Satb1Q60611 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Satb1Q60611 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Satb1Q60611 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Satb1Q60611 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Satb1Q60611 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.95□□□□□ -0.18
Satb1Q60611 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm27320-201ENSMUST00000184892 109 ntBASIC13.95□□□□□ -0.18
Satb1Q60611 Rps4l-202ENSMUST00000204242 789 ntBASIC13.95□□□□□ -0.18
Satb1Q60611 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.95□□□□□ -0.18
Satb1Q60611 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Satb1Q60611 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Satb1Q60611 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Satb1Q60611 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Satb1Q60611 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Satb1Q60611 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Satb1Q60611 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms