Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Gm45186-201ENSMUST00000206874 478 ntBASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trpm3Q5F4S9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Nsd1-205ENSMUST00000224693 852 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trpm3Q5F4S9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm25043-201ENSMUST00000158604 212 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm16296-201ENSMUST00000159905 325 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Mospd4-201ENSMUST00000180618 576 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Mir339-201ENSMUST00000083659 96 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trpm3Q5F4S9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm11439-201ENSMUST00000118598 409 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm11222-201ENSMUST00000119005 738 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm25668-201ENSMUST00000157700 129 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm37489-201ENSMUST00000191883 159 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm10608-202ENSMUST00000213924 676 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.71■□□□□ 0.27
Trpm3Q5F4S9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms