Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gm26464-201ENSMUST00000157094 305 ntBASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf20Q5DTM8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Gm38144-201ENSMUST00000192790 465 ntBASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Gm42612-201ENSMUST00000197986 623 ntBASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Gm43170-201ENSMUST00000199827 612 ntBASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.02■□□□□ 0.16
Rnf20Q5DTM8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC16.02■□□□□ 0.15
Rnf20Q5DTM8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Mir874-201ENSMUST00000104769 76 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm12403-201ENSMUST00000121384 959 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm7730-201ENSMUST00000212486 454 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Gm19220-201ENSMUST00000222682 803 ntBASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf20Q5DTM8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Grk6-205ENSMUST00000224653 2976 ntBASIC16■□□□□ 0.15
Rnf20Q5DTM8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf20Q5DTM8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms