Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Gm27682-201ENSMUST00000183930 110 ntBASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rc3h1Q4VGL6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rc3h1Q4VGL6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Gm37497-201ENSMUST00000195830 798 ntBASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rc3h1Q4VGL6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm13123-201ENSMUST00000122173 492 ntBASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rc3h1Q4VGL6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms