Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Gm45118-201ENSMUST00000208928 825 ntBASIC16.33■□□□□ 0.2
Shank3Q4ACU6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.33■□□□□ 0.2
Shank3Q4ACU6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Gm3508-201ENSMUST00000186012 792 ntBASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Gm44551-201ENSMUST00000208804 171 ntBASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Gm7848-201ENSMUST00000210739 718 ntBASIC16.32■□□□□ 0.2
Shank3Q4ACU6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shank3Q4ACU6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm11667-201ENSMUST00000119828 486 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm19994-201ENSMUST00000217086 586 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm12058-201ENSMUST00000118614 437 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm17040-202ENSMUST00000170597 889 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Gm45433-201ENSMUST00000209386 247 ntBASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shank3Q4ACU6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shank3Q4ACU6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms