Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 AC126253.1-202ENSMUST00000226732 835 ntBASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Arhgef40Q3UPH7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Gm44967-201ENSMUST00000207047 631 ntBASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Arhgef40Q3UPH7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm13736-201ENSMUST00000119272 253 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm14277-201ENSMUST00000121195 360 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm13097-201ENSMUST00000210722 397 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm19208-201ENSMUST00000213861 912 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm14267-206ENSMUST00000226870 1209 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm14130-201ENSMUST00000118417 987 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm13665-201ENSMUST00000120830 528 ntBASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC19.41■□□□□ 0.7
Arhgef40Q3UPH7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Arhgef40Q3UPH7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms