Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Nlrc4Q3UP24 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nlrc4Q3UP24 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nlrc4Q3UP24 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Gm15806-201ENSMUST00000120696 955 ntBASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Nlrc4Q3UP24 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Rubie-203ENSMUST00000227803 2430 ntBASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm5687-201ENSMUST00000118252 640 ntBASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm7287-201ENSMUST00000205267 602 ntBASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.15□□□□□ -0.14
Nlrc4Q3UP24 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Gm6244-201ENSMUST00000178732 841 ntBASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Gm5035-201ENSMUST00000215581 927 ntBASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nlrc4Q3UP24 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms