Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm25604-201ENSMUST00000158359 133 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.28□□□□□ -0.44
Spg11Q3UHA3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Spg11Q3UHA3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Gm23251-201ENSMUST00000103773 110 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Gm9111-201ENSMUST00000219394 709 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Spg11Q3UHA3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Spg11Q3UHA3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm43752-201ENSMUST00000198475 697 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm17812-201ENSMUST00000204935 318 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm45120-201ENSMUST00000208880 408 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm45856-201ENSMUST00000212752 416 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Spg11Q3UHA3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms