Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Limch1Q3UH68 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.86■□□□□ 0.13
Limch1Q3UH68 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Limch1Q3UH68 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Limch1Q3UH68 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Limch1Q3UH68 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Gm12341-201ENSMUST00000119724 503 ntBASIC15.85■□□□□ 0.13
Limch1Q3UH68 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.85■□□□□ 0.13
Limch1Q3UH68 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Gm27701-201ENSMUST00000184498 110 ntBASIC15.85■□□□□ 0.13
Limch1Q3UH68 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.85■□□□□ 0.13
Limch1Q3UH68 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Limch1Q3UH68 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.84■□□□□ 0.13
Limch1Q3UH68 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.84■□□□□ 0.13
Limch1Q3UH68 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Gm18905-201ENSMUST00000205454 928 ntBASIC15.84■□□□□ 0.13
Limch1Q3UH68 Gm5035-201ENSMUST00000215581 927 ntBASIC15.84■□□□□ 0.13
Limch1Q3UH68 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.84■□□□□ 0.13
Limch1Q3UH68 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.84■□□□□ 0.13
Limch1Q3UH68 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limch1Q3UH68 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.83■□□□□ 0.13
Limch1Q3UH68 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Limch1Q3UH68 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Limch1Q3UH68 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Limch1Q3UH68 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Limch1Q3UH68 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.83■□□□□ 0.12
Limch1Q3UH68 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.83■□□□□ 0.12
Limch1Q3UH68 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.83■□□□□ 0.12
Limch1Q3UH68 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limch1Q3UH68 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limch1Q3UH68 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms