Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Mir7023-201ENSMUST00000185093 64 ntBASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gm29667-201ENSMUST00000190817 490 ntBASIC12.69□□□□□ -0.38
Brf2Q3UAW9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Brf2Q3UAW9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm14719-201ENSMUST00000121891 340 ntBASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm21854-201ENSMUST00000179901 471 ntBASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm9797-201ENSMUST00000052902 613 ntBASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Brf2Q3UAW9 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm24694-201ENSMUST00000180054 110 ntBASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm27663-201ENSMUST00000184839 110 ntBASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm17330-201ENSMUST00000221047 165 ntBASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brf2Q3UAW9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms