Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.04□□□□□ -0.64
Trim63Q38HM4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim63Q38HM4 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gm8749-201ENSMUST00000117737 331 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gm16061-201ENSMUST00000122167 857 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gm9172-201ENSMUST00000212092 954 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.03□□□□□ -0.64
Trim63Q38HM4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim63Q38HM4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trim63Q38HM4 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trim63Q38HM4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms