Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm11803-201ENSMUST00000119966 444 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm18054-201ENSMUST00000207539 555 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm5161-201ENSMUST00000075243 853 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Gm24447-201ENSMUST00000083977 338 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.64□□□□□ -0.23
Ebf1Q07802 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ebf1Q07802 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Ebf1Q07802 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm8213-201ENSMUST00000118191 441 ntBASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm6152-201ENSMUST00000151704 340 ntBASIC13.63□□□□□ -0.23
Ebf1Q07802 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm42550-201ENSMUST00000201553 960 ntBASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.63□□□□□ -0.23
Ebf1Q07802 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.63□□□□□ -0.23
Ebf1Q07802 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Ebf1Q07802 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.63□□□□□ -0.23
Ebf1Q07802 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ebf1Q07802 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Mir698-201ENSMUST00000102164 109 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Gm10156-201ENSMUST00000122364 462 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Gm29741-201ENSMUST00000192667 421 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.62□□□□□ -0.23
Ebf1Q07802 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ebf1Q07802 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ebf1Q07802 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms