Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cdx4Q07424 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm28760-201ENSMUST00000185995 736 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm9794-201ENSMUST00000202370 423 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Gm9797-201ENSMUST00000052902 613 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx4Q07424 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.42□□□□□ -0.74
Cdx4Q07424 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdx4Q07424 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm21470-201ENSMUST00000187680 696 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm44719-201ENSMUST00000206404 149 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm19220-201ENSMUST00000222682 803 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.41□□□□□ -0.74
Cdx4Q07424 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Cdx4Q07424 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Cdx4Q07424 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Cdx4Q07424 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cdx4Q07424 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms