Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.54□□□□□ -0.24
Pfdn6Q03958 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pfdn6Q03958 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.53□□□□□ -0.24
Pfdn6Q03958 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm15240-201ENSMUST00000118156 720 ntBASIC13.53□□□□□ -0.24
Pfdn6Q03958 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.53□□□□□ -0.24
Pfdn6Q03958 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.53□□□□□ -0.24
Pfdn6Q03958 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Pfdn6Q03958 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.52□□□□□ -0.24
Pfdn6Q03958 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.52□□□□□ -0.24
Pfdn6Q03958 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pfdn6Q03958 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Pfdn6Q03958 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Mir7023-201ENSMUST00000185093 64 ntBASIC13.52□□□□□ -0.25
Pfdn6Q03958 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pfdn6Q03958 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pfdn6Q03958 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pfdn6Q03958 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms