Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gabpb1Q00420 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Grk6-205ENSMUST00000224653 2976 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Gm5354-201ENSMUST00000182417 973 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.67□□□□□ -0.22
Gabpb1Q00420 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gabpb1Q00420 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gabpb1Q00420 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gabpb1Q00420 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gabpb1Q00420 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms