Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Brca2P97929 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Brca2P97929 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Brca2P97929 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Brca2P97929 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.67□□□□□ -0.38
Brca2P97929 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.67□□□□□ -0.38
Brca2P97929 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Brca2P97929 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Brca2P97929 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.66□□□□□ -0.38
Brca2P97929 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.66□□□□□ -0.38
Brca2P97929 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.66□□□□□ -0.38
Brca2P97929 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm14109-201ENSMUST00000118814 309 ntBASIC12.66□□□□□ -0.38
Brca2P97929 Gm26185-201ENSMUST00000157692 266 ntBASIC12.66□□□□□ -0.38
Brca2P97929 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Brca2P97929 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Brca2P97929 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm13996-201ENSMUST00000118456 430 ntBASIC12.66□□□□□ -0.38
Brca2P97929 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.66□□□□□ -0.38
Brca2P97929 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Brca2P97929 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Brca2P97929 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.66□□□□□ -0.38
Brca2P97929 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Brca2P97929 Gm25043-201ENSMUST00000158604 212 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Gm17391-201ENSMUST00000171036 126 ntBASIC12.65□□□□□ -0.38
Brca2P97929 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.65□□□□□ -0.38
Brca2P97929 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Brca2P97929 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.65□□□□□ -0.38
Brca2P97929 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Brca2P97929 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Brca2P97929 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.65□□□□□ -0.38
Brca2P97929 Gm6722-201ENSMUST00000221586 390 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.65□□□□□ -0.38
Brca2P97929 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Brca2P97929 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Brca2P97929 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Brca2P97929 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.65□□□□□ -0.38
Brca2P97929 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Gm13875-201ENSMUST00000120162 282 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Gm3096-201ENSMUST00000185770 364 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Brca2P97929 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Brca2P97929 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.65□□□□□ -0.38
Brca2P97929 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Brca2P97929 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Brca2P97929 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Brca2P97929 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Brca2P97929 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.64□□□□□ -0.39
Brca2P97929 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.64□□□□□ -0.39
Brca2P97929 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Brca2P97929 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brca2P97929 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Brca2P97929 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Brca2P97929 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.64□□□□□ -0.39
Brca2P97929 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.64□□□□□ -0.39
Brca2P97929 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms