Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Thumpd3P97770 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Thumpd3P97770 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Thumpd3P97770 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Thumpd3P97770 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.71□□□□□ -0.21
Thumpd3P97770 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Thumpd3P97770 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Thumpd3P97770 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Thumpd3P97770 Gm16215-201ENSMUST00000161990 637 ntBASIC13.71□□□□□ -0.21
Thumpd3P97770 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Gm7730-201ENSMUST00000212486 454 ntBASIC13.71□□□□□ -0.21
Thumpd3P97770 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Thumpd3P97770 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Thumpd3P97770 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Thumpd3P97770 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.71□□□□□ -0.22
Thumpd3P97770 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.71□□□□□ -0.22
Thumpd3P97770 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Thumpd3P97770 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm14719-201ENSMUST00000121891 340 ntBASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm5745-201ENSMUST00000183748 313 ntBASIC13.7□□□□□ -0.22
Thumpd3P97770 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gm18027-201ENSMUST00000218947 619 ntBASIC13.7□□□□□ -0.22
Thumpd3P97770 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Syt7-205ENSMUST00000224135 1557 ntBASIC13.7□□□□□ -0.22
Thumpd3P97770 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Thumpd3P97770 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Thumpd3P97770 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.69□□□□□ -0.22
Thumpd3P97770 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Thumpd3P97770 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Thumpd3P97770 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms