Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Gm12882-201ENSMUST00000121696 517 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Rpph1-201ENSMUST00000175096 319 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.28□□□□□ -0.6
Npas1P97459 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.28□□□□□ -0.6
Npas1P97459 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.28□□□□□ -0.6
Npas1P97459 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.28□□□□□ -0.6
Npas1P97459 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Npas1P97459 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Npas1P97459 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.28□□□□□ -0.6
Npas1P97459 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npas1P97459 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npas1P97459 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npas1P97459 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.27□□□□□ -0.6
Npas1P97459 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Npas1P97459 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.27□□□□□ -0.6
Npas1P97459 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Npas1P97459 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.27□□□□□ -0.61
Npas1P97459 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.27□□□□□ -0.61
Npas1P97459 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Npas1P97459 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.27□□□□□ -0.61
Npas1P97459 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Npas1P97459 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Npas1P97459 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.27□□□□□ -0.61
Npas1P97459 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.27□□□□□ -0.61
Npas1P97459 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Npas1P97459 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Npas1P97459 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Npas1P97459 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Npas1P97459 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.26□□□□□ -0.61
Npas1P97459 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Npas1P97459 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Npas1P97459 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms