Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Snora78-201ENSMUST00000158630 128 ntBASIC13.92□□□□□ -0.18
Vps45P97390 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps45P97390 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps45P97390 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Gm42693-201ENSMUST00000196779 631 ntBASIC13.92□□□□□ -0.18
Vps45P97390 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps45P97390 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.92□□□□□ -0.18
Vps45P97390 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Vps45P97390 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Vps45P97390 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps45P97390 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vps45P97390 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Vps45P97390 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps45P97390 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.91□□□□□ -0.18
Vps45P97390 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.91□□□□□ -0.18
Vps45P97390 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps45P97390 Gm27486-201ENSMUST00000184923 80 ntBASIC13.91□□□□□ -0.18
Vps45P97390 Gm45784-201ENSMUST00000188360 142 ntBASIC13.91□□□□□ -0.18
Vps45P97390 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.91□□□□□ -0.18
Vps45P97390 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vps45P97390 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps45P97390 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps45P97390 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Vps45P97390 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Mir1247-201ENSMUST00000116706 82 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Gm15770-201ENSMUST00000117498 584 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Gm15376-201ENSMUST00000122258 783 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Gm8062-201ENSMUST00000139696 444 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.9□□□□□ -0.18
Vps45P97390 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Vps45P97390 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vps45P97390 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms