Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm18307-201ENSMUST00000206864 949 ntBASIC14.63□□□□□ -0.07
Trim43cP86449 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.63□□□□□ -0.07
Trim43cP86449 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim43cP86449 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trim43cP86449 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim43cP86449 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim43cP86449 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Trim43cP86449 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trim43cP86449 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim43cP86449 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim43cP86449 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim43cP86449 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim43cP86449 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.62□□□□□ -0.07
Trim43cP86449 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.62□□□□□ -0.07
Trim43cP86449 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Gm38223-201ENSMUST00000194484 695 ntBASIC14.62□□□□□ -0.07
Trim43cP86449 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim43cP86449 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim43cP86449 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim43cP86449 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim43cP86449 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.62□□□□□ -0.07
Trim43cP86449 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.62□□□□□ -0.07
Trim43cP86449 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim43cP86449 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim43cP86449 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim43cP86449 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.61□□□□□ -0.07
Trim43cP86449 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Trim43cP86449 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.61□□□□□ -0.07
Trim43cP86449 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.61□□□□□ -0.07
Trim43cP86449 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Trim43cP86449 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.61□□□□□ -0.07
Trim43cP86449 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trim43cP86449 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trim43cP86449 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms