Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.01□□□□□ -0.49
SgcbP82349 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.01□□□□□ -0.49
SgcbP82349 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcbP82349 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SgcbP82349 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.01□□□□□ -0.49
SgcbP82349 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgcbP82349 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12□□□□□ -0.49
SgcbP82349 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12□□□□□ -0.49
SgcbP82349 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Gm16342-201ENSMUST00000124025 1025 ntBASIC12□□□□□ -0.49
SgcbP82349 Gm38144-201ENSMUST00000192790 465 ntBASIC12□□□□□ -0.49
SgcbP82349 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12□□□□□ -0.49
SgcbP82349 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12□□□□□ -0.49
SgcbP82349 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SgcbP82349 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12□□□□□ -0.49
SgcbP82349 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SgcbP82349 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.99□□□□□ -0.49
SgcbP82349 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SgcbP82349 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.99□□□□□ -0.49
SgcbP82349 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.99□□□□□ -0.49
SgcbP82349 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.99□□□□□ -0.49
SgcbP82349 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SgcbP82349 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.99□□□□□ -0.49
SgcbP82349 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.99□□□□□ -0.49
SgcbP82349 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.99□□□□□ -0.49
SgcbP82349 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.99□□□□□ -0.49
SgcbP82349 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.99□□□□□ -0.49
SgcbP82349 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SgcbP82349 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SgcbP82349 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SgcbP82349 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.98□□□□□ -0.49
SgcbP82349 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.98□□□□□ -0.49
SgcbP82349 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Gm13689-201ENSMUST00000119360 685 ntBASIC11.98□□□□□ -0.49
SgcbP82349 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.98□□□□□ -0.49
SgcbP82349 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms