Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CiitaP79621 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CiitaP79621 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CiitaP79621 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.55□□□□□ -0.08
CiitaP79621 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.55□□□□□ -0.08
CiitaP79621 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CiitaP79621 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.54□□□□□ -0.08
CiitaP79621 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Snora78-201ENSMUST00000158630 128 ntBASIC14.54□□□□□ -0.08
CiitaP79621 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.54□□□□□ -0.08
CiitaP79621 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Gm44069-201ENSMUST00000204898 506 ntBASIC14.54□□□□□ -0.08
CiitaP79621 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.54□□□□□ -0.08
CiitaP79621 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.54□□□□□ -0.08
CiitaP79621 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.54□□□□□ -0.08
CiitaP79621 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.54□□□□□ -0.08
CiitaP79621 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.54□□□□□ -0.08
CiitaP79621 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CiitaP79621 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CiitaP79621 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CiitaP79621 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CiitaP79621 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.53□□□□□ -0.08
CiitaP79621 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.53□□□□□ -0.08
CiitaP79621 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.53□□□□□ -0.08
CiitaP79621 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.53□□□□□ -0.08
CiitaP79621 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.53□□□□□ -0.08
CiitaP79621 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CiitaP79621 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CiitaP79621 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CiitaP79621 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CiitaP79621 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms