Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Msx3P70354 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Msx3P70354 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.84□□□□□ -0.19
Msx3P70354 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Mir7023-201ENSMUST00000185093 64 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Gm38144-201ENSMUST00000192790 465 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.84□□□□□ -0.19
Msx3P70354 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.84□□□□□ -0.19
Msx3P70354 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.84□□□□□ -0.19
Msx3P70354 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Gm5867-201ENSMUST00000063197 592 ntBASIC13.84□□□□□ -0.19
Msx3P70354 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.84□□□□□ -0.19
Msx3P70354 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Msx3P70354 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Msx3P70354 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msx3P70354 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Msx3P70354 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Msx3P70354 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.83□□□□□ -0.19
Msx3P70354 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Msx3P70354 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Msx3P70354 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.83□□□□□ -0.2
Msx3P70354 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Msx3P70354 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm12403-201ENSMUST00000121384 959 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.83□□□□□ -0.2
Msx3P70354 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.83□□□□□ -0.2
Msx3P70354 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.83□□□□□ -0.2
Msx3P70354 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msx3P70354 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Msx3P70354 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Msx3P70354 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msx3P70354 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msx3P70354 Gm11524-201ENSMUST00000119349 807 ntBASIC13.82□□□□□ -0.2
Msx3P70354 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.82□□□□□ -0.2
Msx3P70354 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msx3P70354 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.82□□□□□ -0.2
Msx3P70354 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.82□□□□□ -0.2
Msx3P70354 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms