Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sssca1P56873 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sssca1P56873 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.87□□□□□ -0.67
Sssca1P56873 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Gm11779-201ENSMUST00000118541 368 ntBASIC10.87□□□□□ -0.67
Sssca1P56873 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.87□□□□□ -0.67
Sssca1P56873 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.87□□□□□ -0.67
Sssca1P56873 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.87□□□□□ -0.67
Sssca1P56873 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.87□□□□□ -0.67
Sssca1P56873 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sssca1P56873 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Sssca1P56873 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sssca1P56873 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm13365-201ENSMUST00000121188 973 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.86□□□□□ -0.67
Sssca1P56873 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm16476-201ENSMUST00000221544 139 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sssca1P56873 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sssca1P56873 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sssca1P56873 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.86□□□□□ -0.67
Sssca1P56873 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.86□□□□□ -0.67
Sssca1P56873 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms