Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.49□□□□□ -0.41
CckbrP56481 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.49□□□□□ -0.41
CckbrP56481 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.49□□□□□ -0.41
CckbrP56481 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CckbrP56481 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.49□□□□□ -0.41
CckbrP56481 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CckbrP56481 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.48□□□□□ -0.41
CckbrP56481 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.48□□□□□ -0.41
CckbrP56481 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CckbrP56481 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CckbrP56481 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.48□□□□□ -0.41
CckbrP56481 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.48□□□□□ -0.41
CckbrP56481 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm38144-201ENSMUST00000192790 465 ntBASIC12.48□□□□□ -0.41
CckbrP56481 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.48□□□□□ -0.41
CckbrP56481 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.48□□□□□ -0.41
CckbrP56481 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CckbrP56481 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CckbrP56481 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CckbrP56481 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Gm15371-201ENSMUST00000117057 784 ntBASIC12.47□□□□□ -0.41
CckbrP56481 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.47□□□□□ -0.41
CckbrP56481 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Mir6392-201ENSMUST00000184924 108 ntBASIC12.47□□□□□ -0.41
CckbrP56481 Mir7654-201ENSMUST00000185082 70 ntBASIC12.47□□□□□ -0.41
CckbrP56481 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.47□□□□□ -0.41
CckbrP56481 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.47□□□□□ -0.41
CckbrP56481 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.47□□□□□ -0.41
CckbrP56481 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.47□□□□□ -0.41
CckbrP56481 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.47□□□□□ -0.41
CckbrP56481 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.47□□□□□ -0.41
CckbrP56481 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CckbrP56481 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CckbrP56481 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.46□□□□□ -0.41
CckbrP56481 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CckbrP56481 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms