Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.06□□□□□ -0.16
NcanP55066 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NcanP55066 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.06□□□□□ -0.16
NcanP55066 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.06□□□□□ -0.16
NcanP55066 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Gm3096-201ENSMUST00000185770 364 ntBASIC14.06□□□□□ -0.16
NcanP55066 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.06□□□□□ -0.16
NcanP55066 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.06□□□□□ -0.16
NcanP55066 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.06□□□□□ -0.16
NcanP55066 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NcanP55066 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.06□□□□□ -0.16
NcanP55066 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NcanP55066 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NcanP55066 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.06□□□□□ -0.16
NcanP55066 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NcanP55066 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.05□□□□□ -0.16
NcanP55066 Gm9062-201ENSMUST00000117712 727 ntBASIC14.05□□□□□ -0.16
NcanP55066 Gm13996-201ENSMUST00000118456 430 ntBASIC14.05□□□□□ -0.16
NcanP55066 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.05□□□□□ -0.16
NcanP55066 Gm8913-201ENSMUST00000209491 641 ntBASIC14.05□□□□□ -0.16
NcanP55066 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.05□□□□□ -0.16
NcanP55066 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NcanP55066 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
NcanP55066 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NcanP55066 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NcanP55066 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.05□□□□□ -0.16
NcanP55066 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NcanP55066 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.04□□□□□ -0.16
NcanP55066 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.04□□□□□ -0.16
NcanP55066 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NcanP55066 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NcanP55066 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NcanP55066 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NcanP55066 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
NcanP55066 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.04□□□□□ -0.16
NcanP55066 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.04□□□□□ -0.16
NcanP55066 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.04□□□□□ -0.16
NcanP55066 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.04□□□□□ -0.16
NcanP55066 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NcanP55066 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms