Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.47□□□□□ -0.25
Fdft1P53798 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.47□□□□□ -0.25
Fdft1P53798 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.47□□□□□ -0.25
Fdft1P53798 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.47□□□□□ -0.25
Fdft1P53798 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Fdft1P53798 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fdft1P53798 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.46□□□□□ -0.25
Fdft1P53798 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.46□□□□□ -0.25
Fdft1P53798 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.46□□□□□ -0.25
Fdft1P53798 Gm6912-201ENSMUST00000117218 544 ntBASIC13.46□□□□□ -0.25
Fdft1P53798 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Fdft1P53798 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.46□□□□□ -0.25
Fdft1P53798 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.46□□□□□ -0.25
Fdft1P53798 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Gm24420-201ENSMUST00000176676 59 ntBASIC13.46□□□□□ -0.25
Fdft1P53798 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.46□□□□□ -0.25
Fdft1P53798 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.46□□□□□ -0.25
Fdft1P53798 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.46□□□□□ -0.25
Fdft1P53798 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Fdft1P53798 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Fdft1P53798 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Fdft1P53798 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fdft1P53798 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fdft1P53798 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fdft1P53798 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fdft1P53798 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.46□□□□□ -0.26
Fdft1P53798 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fdft1P53798 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fdft1P53798 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Fdft1P53798 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.45□□□□□ -0.26
Fdft1P53798 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.45□□□□□ -0.26
Fdft1P53798 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Fdft1P53798 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fdft1P53798 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Fdft1P53798 Gm12151-201ENSMUST00000121374 290 ntBASIC13.45□□□□□ -0.26
Fdft1P53798 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Fdft1P53798 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms