Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox3P53784 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Gm8749-201ENSMUST00000117737 331 ntBASIC12.92□□□□□ -0.34
Sox3P53784 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.92□□□□□ -0.34
Sox3P53784 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox3P53784 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox3P53784 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox3P53784 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox3P53784 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.92□□□□□ -0.34
Sox3P53784 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Sox3P53784 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sox3P53784 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox3P53784 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 BC001981-202ENSMUST00000191393 1545 ntBASIC12.92□□□□□ -0.34
Sox3P53784 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Sox3P53784 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm29649-201ENSMUST00000185649 419 ntBASIC12.91□□□□□ -0.34
Sox3P53784 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.91□□□□□ -0.34
Sox3P53784 Gm3786-201ENSMUST00000202659 378 ntBASIC12.91□□□□□ -0.34
Sox3P53784 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.91□□□□□ -0.34
Sox3P53784 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.91□□□□□ -0.34
Sox3P53784 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Sox3P53784 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox3P53784 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox3P53784 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox3P53784 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Sox3P53784 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sox3P53784 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Sox3P53784 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox3P53784 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox3P53784 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 Gm13464-201ENSMUST00000119418 935 ntBASIC12.9□□□□□ -0.34
Sox3P53784 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox3P53784 Gm5370-201ENSMUST00000187187 574 ntBASIC12.9□□□□□ -0.34
Sox3P53784 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.9□□□□□ -0.34
Sox3P53784 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox3P53784 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox3P53784 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox3P53784 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms