Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SftpdP50404 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
SftpdP50404 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SftpdP50404 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SftpdP50404 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpdP50404 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.17□□□□□ -0.14
SftpdP50404 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpdP50404 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SftpdP50404 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.17□□□□□ -0.14
SftpdP50404 Gm13689-201ENSMUST00000119360 685 ntBASIC14.17□□□□□ -0.14
SftpdP50404 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Gm38223-201ENSMUST00000194484 695 ntBASIC14.17□□□□□ -0.14
SftpdP50404 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.17□□□□□ -0.14
SftpdP50404 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SftpdP50404 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SftpdP50404 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.16□□□□□ -0.14
SftpdP50404 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SftpdP50404 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.16□□□□□ -0.14
SftpdP50404 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.16□□□□□ -0.14
SftpdP50404 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SftpdP50404 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.16□□□□□ -0.14
SftpdP50404 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
SftpdP50404 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.15□□□□□ -0.14
SftpdP50404 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpdP50404 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SftpdP50404 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Gm15371-201ENSMUST00000117057 784 ntBASIC14.15□□□□□ -0.14
SftpdP50404 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SftpdP50404 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SftpdP50404 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpdP50404 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SftpdP50404 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.15□□□□□ -0.14
SftpdP50404 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SftpdP50404 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms