Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm11667-201ENSMUST00000119828 486 ntBASIC14.81□□□□□ -0.04
Brca1P48754 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.81□□□□□ -0.04
Brca1P48754 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.81□□□□□ -0.04
Brca1P48754 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Gm45118-201ENSMUST00000208928 825 ntBASIC14.81□□□□□ -0.04
Brca1P48754 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.81□□□□□ -0.04
Brca1P48754 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Brca1P48754 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.81□□□□□ -0.04
Brca1P48754 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brca1P48754 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Brca1P48754 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.8□□□□□ -0.04
Brca1P48754 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Brca1P48754 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Gm23699-201ENSMUST00000158835 135 ntBASIC14.8□□□□□ -0.04
Brca1P48754 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.8□□□□□ -0.04
Brca1P48754 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brca1P48754 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Brca1P48754 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Brca1P48754 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.79□□□□□ -0.04
Brca1P48754 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Brca1P48754 Gm11930-201ENSMUST00000117788 190 ntBASIC14.79□□□□□ -0.04
Brca1P48754 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Brca1P48754 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.79□□□□□ -0.04
Brca1P48754 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.79□□□□□ -0.04
Brca1P48754 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.79□□□□□ -0.04
Brca1P48754 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.79□□□□□ -0.04
Brca1P48754 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Brca1P48754 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Brca1P48754 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Brca1P48754 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.79□□□□□ -0.04
Brca1P48754 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brca1P48754 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Brca1P48754 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.78□□□□□ -0.04
Brca1P48754 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brca1P48754 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms