Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx2P48379 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx2P48379 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfx2P48379 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Rfx2P48379 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx2P48379 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Gm15376-201ENSMUST00000122258 783 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfx2P48379 Gm27839-201ENSMUST00000184242 106 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.1□□□□□ -0.15
Rfx2P48379 Gm38223-201ENSMUST00000194484 695 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Gm8463-201ENSMUST00000208573 613 ntBASIC14.1□□□□□ -0.15
Rfx2P48379 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.1□□□□□ -0.15
Rfx2P48379 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Rfx2P48379 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx2P48379 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rfx2P48379 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfx2P48379 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfx2P48379 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfx2P48379 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Gm11814-201ENSMUST00000119515 929 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.09□□□□□ -0.15
Rfx2P48379 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Mir7085-201ENSMUST00000184353 66 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Gm7287-201ENSMUST00000205267 602 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Gm6983-201ENSMUST00000214912 628 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.09□□□□□ -0.15
Rfx2P48379 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfx2P48379 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.09□□□□□ -0.15
Rfx2P48379 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rfx2P48379 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.09□□□□□ -0.15
Rfx2P48379 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfx2P48379 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfx2P48379 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx2P48379 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfx2P48379 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms