Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Hist1h1aP43275 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm4995-201ENSMUST00000117247 432 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm44335-201ENSMUST00000196879 141 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm44297-201ENSMUST00000198304 141 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm44346-201ENSMUST00000198851 141 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Gm44719-201ENSMUST00000206404 149 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Paupar-201ENSMUST00000194826 3482 ntBASIC11.11□□□□□ -0.63
Hist1h1aP43275 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hist1h1aP43275 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.1□□□□□ -0.63
Hist1h1aP43275 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm29541-201ENSMUST00000191351 678 ntBASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gm43474-201ENSMUST00000196415 774 ntBASIC11.1□□□□□ -0.63
Hist1h1aP43275 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hist1h1aP43275 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms