Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.34□□□□□ -0.43
Nkx2-2P42586 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.34□□□□□ -0.43
Nkx2-2P42586 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.34□□□□□ -0.43
Nkx2-2P42586 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Gm45668-201ENSMUST00000211271 493 ntBASIC12.34□□□□□ -0.43
Nkx2-2P42586 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-2P42586 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Nkx2-2P42586 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-2P42586 Grk6-205ENSMUST00000224653 2976 ntBASIC12.33□□□□□ -0.43
Nkx2-2P42586 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.33□□□□□ -0.43
Nkx2-2P42586 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Mir874-201ENSMUST00000104769 76 ntBASIC12.33□□□□□ -0.44
Nkx2-2P42586 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Mir7221-201ENSMUST00000184009 72 ntBASIC12.33□□□□□ -0.44
Nkx2-2P42586 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.33□□□□□ -0.44
Nkx2-2P42586 Gm26315-201ENSMUST00000083890 321 ntBASIC12.33□□□□□ -0.44
Nkx2-2P42586 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-2P42586 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.32□□□□□ -0.44
Nkx2-2P42586 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-2P42586 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms