Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col18a1P39061 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col18a1P39061 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.4■□□□□ 0.38
Col18a1P39061 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col18a1P39061 Gm9230-201ENSMUST00000188228 532 ntBASIC17.4■□□□□ 0.38
Col18a1P39061 Gm34023-201ENSMUST00000195539 217 ntBASIC17.4■□□□□ 0.38
Col18a1P39061 Gm17827-201ENSMUST00000211825 742 ntBASIC17.4■□□□□ 0.38
Col18a1P39061 AC154176.1-201ENSMUST00000225897 220 ntBASIC17.4■□□□□ 0.38
Col18a1P39061 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col18a1P39061 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col18a1P39061 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.39■□□□□ 0.38
Col18a1P39061 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col18a1P39061 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.39■□□□□ 0.37
Col18a1P39061 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col18a1P39061 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC17.39■□□□□ 0.37
Col18a1P39061 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm25880-201ENSMUST00000104331 132 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm28071-201ENSMUST00000190355 478 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm4482-201ENSMUST00000200876 742 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm45398-201ENSMUST00000210561 165 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.39■□□□□ 0.37
Col18a1P39061 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.39■□□□□ 0.37
Col18a1P39061 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col18a1P39061 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC17.38■□□□□ 0.37
Col18a1P39061 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm6771-201ENSMUST00000182716 1001 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Col18a1P39061 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col18a1P39061 Gm12816-201ENSMUST00000118069 1212 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Col18a1P39061 Gm25951-201ENSMUST00000175330 64 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm37246-201ENSMUST00000192665 835 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col18a1P39061 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC17.38■□□□□ 0.37
Col18a1P39061 Gm5879-201ENSMUST00000089501 1209 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.38■□□□□ 0.37
Col18a1P39061 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col18a1P39061 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col18a1P39061 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC17.37■□□□□ 0.37
Col18a1P39061 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC17.37■□□□□ 0.37
Col18a1P39061 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC17.37■□□□□ 0.37
Col18a1P39061 Mir7221-201ENSMUST00000184009 72 ntBASIC17.37■□□□□ 0.37
Col18a1P39061 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col18a1P39061 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Col18a1P39061 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms