Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.45□□□□□ -0.42
Foxa1P35582 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.45□□□□□ -0.42
Foxa1P35582 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Foxa1P35582 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxa1P35582 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Foxa1P35582 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Foxa1P35582 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
Foxa1P35582 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm38144-201ENSMUST00000192790 465 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Gm38223-201ENSMUST00000194484 695 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Gm8515-201ENSMUST00000194852 576 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.44□□□□□ -0.42
Foxa1P35582 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Foxa1P35582 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm6180-201ENSMUST00000065243 498 ntBASIC12.44□□□□□ -0.42
Foxa1P35582 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxa1P35582 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxa1P35582 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Foxa1P35582 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Foxa1P35582 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Foxa1P35582 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.43□□□□□ -0.42
Foxa1P35582 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Gm15678-201ENSMUST00000117573 960 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxa1P35582 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.43□□□□□ -0.42
Foxa1P35582 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Gm6745-201ENSMUST00000199216 526 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Foxa1P35582 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxa1P35582 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.43□□□□□ -0.42
Foxa1P35582 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Foxa1P35582 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms