Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sftpa1P35242 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sftpa1P35242 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm16479-201ENSMUST00000121706 932 ntBASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm2231-201ENSMUST00000125661 612 ntBASIC12.38□□□□□ -0.43
Sftpa1P35242 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Sftpa1P35242 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.38□□□□□ -0.43
Sftpa1P35242 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sftpa1P35242 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.37□□□□□ -0.43
Sftpa1P35242 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gm12363-201ENSMUST00000122250 668 ntBASIC12.37□□□□□ -0.43
Sftpa1P35242 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Gm44069-201ENSMUST00000204898 506 ntBASIC12.37□□□□□ -0.43
Sftpa1P35242 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.37□□□□□ -0.43
Sftpa1P35242 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.37□□□□□ -0.43
Sftpa1P35242 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.37□□□□□ -0.43
Sftpa1P35242 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sftpa1P35242 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sftpa1P35242 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.36□□□□□ -0.43
Sftpa1P35242 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.36□□□□□ -0.43
Sftpa1P35242 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.36□□□□□ -0.43
Sftpa1P35242 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sftpa1P35242 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sftpa1P35242 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.36□□□□□ -0.43
Sftpa1P35242 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms