Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Slc6a1P31648 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Slc6a1P31648 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm14701-201ENSMUST00000117156 348 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm10154-201ENSMUST00000084445 354 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.58□□□□□ -0.56
Slc6a1P31648 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Slc6a1P31648 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Slc6a1P31648 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Slc6a1P31648 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.57□□□□□ -0.56
Slc6a1P31648 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.57□□□□□ -0.56
Slc6a1P31648 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.57□□□□□ -0.56
Slc6a1P31648 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.57□□□□□ -0.56
Slc6a1P31648 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Slc6a1P31648 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Slc6a1P31648 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms