Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl6P27784 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccl6P27784 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Ccl6P27784 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.5□□□□□ -0.73
Ccl6P27784 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Ccl6P27784 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccl6P27784 Gm29667-201ENSMUST00000190817 490 ntBASIC10.5□□□□□ -0.73
Ccl6P27784 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccl6P27784 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.5□□□□□ -0.73
Ccl6P27784 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccl6P27784 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Ccl6P27784 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl6P27784 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ccl6P27784 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl6P27784 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.5□□□□□ -0.73
Ccl6P27784 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl6P27784 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ccl6P27784 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Ccl6P27784 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccl6P27784 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Gm6912-201ENSMUST00000117218 544 ntBASIC10.49□□□□□ -0.73
Ccl6P27784 Mir7023-201ENSMUST00000185093 64 ntBASIC10.49□□□□□ -0.73
Ccl6P27784 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Ccl6P27784 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl6P27784 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl6P27784 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccl6P27784 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.49□□□□□ -0.73
Ccl6P27784 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl6P27784 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.49□□□□□ -0.73
Ccl6P27784 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccl6P27784 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccl6P27784 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.49□□□□□ -0.73
Ccl6P27784 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl6P27784 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccl6P27784 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.48□□□□□ -0.73
Ccl6P27784 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Ccl6P27784 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ccl6P27784 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccl6P27784 Gm14057-201ENSMUST00000120631 482 ntBASIC10.48□□□□□ -0.73
Ccl6P27784 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms