Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.87□□□□□ -0.03
Hoxc6P10629 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hoxc6P10629 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxc6P10629 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Gm12997-201ENSMUST00000120207 640 ntBASIC14.86□□□□□ -0.03
Hoxc6P10629 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Gm2383-201ENSMUST00000181461 807 ntBASIC14.86□□□□□ -0.03
Hoxc6P10629 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
Hoxc6P10629 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.86□□□□□ -0.03
Hoxc6P10629 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc6P10629 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gm18584-201ENSMUST00000203098 964 ntBASIC14.85□□□□□ -0.03
Hoxc6P10629 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.85□□□□□ -0.03
Hoxc6P10629 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc6P10629 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.85□□□□□ -0.03
Hoxc6P10629 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxc6P10629 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.84□□□□□ -0.03
Hoxc6P10629 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms