Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.74□□□□□ -0.37
ApoeP08226 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.74□□□□□ -0.37
ApoeP08226 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ApoeP08226 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ApoeP08226 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ApoeP08226 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
ApoeP08226 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Gm18733-201ENSMUST00000173950 856 ntBASIC12.73□□□□□ -0.37
ApoeP08226 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ApoeP08226 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.73□□□□□ -0.37
ApoeP08226 Dupd1-202ENSMUST00000224735 548 ntBASIC12.73□□□□□ -0.37
ApoeP08226 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.73□□□□□ -0.37
ApoeP08226 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ApoeP08226 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ApoeP08226 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ApoeP08226 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.72□□□□□ -0.37
ApoeP08226 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Gm1401-201ENSMUST00000122048 772 ntBASIC12.72□□□□□ -0.37
ApoeP08226 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ApoeP08226 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.72□□□□□ -0.37
ApoeP08226 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ApoeP08226 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ApoeP08226 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.71□□□□□ -0.37
ApoeP08226 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.71□□□□□ -0.37
ApoeP08226 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.71□□□□□ -0.37
ApoeP08226 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.71□□□□□ -0.37
ApoeP08226 Gm11745-201ENSMUST00000121669 448 ntBASIC12.71□□□□□ -0.37
ApoeP08226 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ApoeP08226 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ApoeP08226 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.71□□□□□ -0.37
ApoeP08226 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms