Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
P04213 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Gm27838-201ENSMUST00000184829 128 ntBASIC12.91□□□□□ -0.34
P04213 Gm9797-201ENSMUST00000052902 613 ntBASIC12.91□□□□□ -0.34
P04213 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.91□□□□□ -0.34
P04213 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.91□□□□□ -0.34
P04213 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
P04213 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.91□□□□□ -0.34
P04213 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04213 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
P04213 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
P04213 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.9□□□□□ -0.34
P04213 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P04213 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.9□□□□□ -0.34
P04213 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.9□□□□□ -0.34
P04213 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.9□□□□□ -0.34
P04213 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.9□□□□□ -0.34
P04213 Gm5279-201ENSMUST00000199575 745 ntBASIC12.9□□□□□ -0.34
P04213 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.9□□□□□ -0.34
P04213 Gm44872-201ENSMUST00000207864 420 ntBASIC12.9□□□□□ -0.34
P04213 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P04213 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P04213 Gm24447-201ENSMUST00000083977 338 ntBASIC12.9□□□□□ -0.34
P04213 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P04213 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P04213 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.9□□□□□ -0.34
P04213 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04213 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
P04213 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
P04213 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
P04213 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
P04213 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
P04213 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.89□□□□□ -0.35
P04213 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
P04213 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
P04213 Gm12485-201ENSMUST00000119641 291 ntBASIC12.89□□□□□ -0.35
P04213 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
P04213 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
P04213 Gm24694-201ENSMUST00000180054 110 ntBASIC12.89□□□□□ -0.35
P04213 Mir7684-201ENSMUST00000183858 60 ntBASIC12.89□□□□□ -0.35
P04213 Mir8102-201ENSMUST00000184148 139 ntBASIC12.89□□□□□ -0.35
P04213 Gm27663-201ENSMUST00000184839 110 ntBASIC12.89□□□□□ -0.35
P04213 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.89□□□□□ -0.35
P04213 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms