Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hoxa3P02831 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hoxa3P02831 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hoxa3P02831 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.3□□□□□ -0.6
Hoxa3P02831 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hoxa3P02831 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa3P02831 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Mir698-201ENSMUST00000102164 109 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm15429-201ENSMUST00000151268 798 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Mir7085-201ENSMUST00000184353 66 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm27892-201ENSMUST00000185017 106 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm6266-201ENSMUST00000203844 806 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.29□□□□□ -0.6
Hoxa3P02831 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hoxa3P02831 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.29□□□□□ -0.6
Hoxa3P02831 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm12485-201ENSMUST00000119641 291 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm27772-201ENSMUST00000184900 187 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.28□□□□□ -0.6
Hoxa3P02831 Gm44719-201ENSMUST00000206404 149 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms