Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.18□□□□□ -0.78
P01739 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.18□□□□□ -0.78
P01739 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01739 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.18□□□□□ -0.78
P01739 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.18□□□□□ -0.78
P01739 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P01739 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
P01739 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.18□□□□□ -0.78
P01739 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
P01739 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P01739 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P01739 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P01739 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
P01739 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.17□□□□□ -0.78
P01739 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.17□□□□□ -0.78
P01739 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.17□□□□□ -0.78
P01739 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.17□□□□□ -0.78
P01739 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.17□□□□□ -0.78
P01739 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P01739 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
P01739 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.17□□□□□ -0.78
P01739 Gm15770-201ENSMUST00000117498 584 ntBASIC10.17□□□□□ -0.78
P01739 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.17□□□□□ -0.78
P01739 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
P01739 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Gm18041-201ENSMUST00000218210 618 ntBASIC10.17□□□□□ -0.78
P01739 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.17□□□□□ -0.78
P01739 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.17□□□□□ -0.78
P01739 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P01739 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P01739 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
P01739 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P01739 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.16□□□□□ -0.78
P01739 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.16□□□□□ -0.78
P01739 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
P01739 Gm13223-201ENSMUST00000118609 747 ntBASIC10.16□□□□□ -0.78
P01739 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.16□□□□□ -0.78
P01739 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
P01739 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.16□□□□□ -0.78
P01739 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P01739 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.16□□□□□ -0.78
P01739 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.16□□□□□ -0.78
P01739 Gm7775-201ENSMUST00000218871 853 ntBASIC10.16□□□□□ -0.78
P01739 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.16□□□□□ -0.78
P01739 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms