Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1aO89116 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1aO89116 Mir698-201ENSMUST00000102164 109 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1aO89116 Gm13392-201ENSMUST00000117708 150 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Gm14660-201ENSMUST00000119809 575 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.51□□□□□ -0.09
Vti1aO89116 Snora78-201ENSMUST00000158630 128 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Gm42693-201ENSMUST00000196779 631 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.51□□□□□ -0.09
Vti1aO89116 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1aO89116 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vti1aO89116 Rubie-203ENSMUST00000227803 2430 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.51□□□□□ -0.09
Vti1aO89116 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.51□□□□□ -0.09
Vti1aO89116 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vti1aO89116 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.5□□□□□ -0.09
Vti1aO89116 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Gm37424-201ENSMUST00000191727 561 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Gm44397-201ENSMUST00000195950 113 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Gm45331-201ENSMUST00000209868 554 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Gm40466-201ENSMUST00000212174 422 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.5□□□□□ -0.09
Vti1aO89116 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Vti1aO89116 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vti1aO89116 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Vti1aO89116 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Vti1aO89116 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Vti1aO89116 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.49□□□□□ -0.09
Vti1aO89116 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.49□□□□□ -0.09
Vti1aO89116 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.49□□□□□ -0.09
Vti1aO89116 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.49□□□□□ -0.09
Vti1aO89116 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vti1aO89116 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.49□□□□□ -0.09
Vti1aO89116 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Vti1aO89116 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.49□□□□□ -0.09
Vti1aO89116 Olfr582-201ENSMUST00000098212 960 ntBASIC14.49□□□□□ -0.09
Vti1aO89116 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.49□□□□□ -0.09
Vti1aO89116 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vti1aO89116 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Vti1aO89116 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms