Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm26506-201ENSMUST00000179692 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm25086-201ENSMUST00000179931 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm23243-201ENSMUST00000180047 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24659-201ENSMUST00000180212 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm24169-201ENSMUST00000180244 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm23689-201ENSMUST00000180354 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm4804-201ENSMUST00000182234 999 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm27359-201ENSMUST00000184153 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm27785-201ENSMUST00000184268 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm27466-201ENSMUST00000184396 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Gm27703-201ENSMUST00000184836 110 ntBASIC13.89□□□□□ -0.19
CopeO89079 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CopeO89079 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CopeO89079 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CopeO89079 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CopeO89079 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CopeO89079 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopeO89079 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CopeO89079 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopeO89079 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Mir1897-201ENSMUST00000122581 272 ntBASIC13.88□□□□□ -0.19
CopeO89079 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.88□□□□□ -0.19
CopeO89079 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.88□□□□□ -0.19
CopeO89079 Gm44335-201ENSMUST00000196879 141 ntBASIC13.88□□□□□ -0.19
CopeO89079 Gm44297-201ENSMUST00000198304 141 ntBASIC13.88□□□□□ -0.19
CopeO89079 Gm44346-201ENSMUST00000198851 141 ntBASIC13.88□□□□□ -0.19
CopeO89079 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.88□□□□□ -0.19
CopeO89079 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopeO89079 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopeO89079 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopeO89079 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CopeO89079 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopeO89079 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopeO89079 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.88□□□□□ -0.19
CopeO89079 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CopeO89079 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.87□□□□□ -0.19
CopeO89079 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Gm15770-201ENSMUST00000117498 584 ntBASIC13.87□□□□□ -0.19
CopeO89079 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.87□□□□□ -0.19
CopeO89079 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
CopeO89079 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CopeO89079 Gm8000-201ENSMUST00000188378 592 ntBASIC13.87□□□□□ -0.19
CopeO89079 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms